BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D06SP1|AL428540
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig886 1599 0.0
>3x_Contig886
Length = 4262
Score = 1599 bits (799), Expect = 0.0
Identities = 821/835 (98%), Gaps = 1/835 (0%)
Strand = Plus / Minus
Query: 1 agccaactgcatccgcaactgttcattttcctgttgcagcagactgttcttgcgttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3592 agccaactgcatccgcaactgttcattttcctgttgcagcagactgttcttgcgttccaa 3533
Query: 61 atgtttgatgtactcatgagattttgacaaaatttgaaccttgttgactttcgaaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 atgtttgatgtactcatgagattttgacaaaatttgaaccttgttgactttcgaaggtgg 3473
Query: 121 agccaacccttctagcgattccacaggaatagagttatcgtcacaccatcgaagtgtcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 agccaacccttctagcgattccacaggaatagagttatcgtcacaccatcgaagtgtcgg 3413
Query: 181 taccgagtttctcaaaaactggaaatgagtgttaatgttgttccgatactttttctcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3412 taccgagtttctcaaaaactggaaatgagtgttaatgttgttccgatactttttctcact 3353
Query: 241 atcgttatgacccgaggaggtgttccccgaatggttcacagcagcaccaccaccaccaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 atcgttatgacccgaggaggtgttccccgaatggttcacagcagcaccaccaccaccaga 3293
Query: 301 aaccgtgggagccaatggagtcattaacgcaccgtggttcgtaaatyctgggatcgcagg 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3292 aaccgtgggagccaatggagtcattaacgcaccgtggttcgtaaatcctgggatcgcagg 3233
Query: 361 gagcacgggaagcccagtcactgcagcgttaaacacagcgttcgggttgtttccaacgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3232 gagcacgggaagcccagtcactgcagcgttaaacacagcgttcgggttgtttccaacgcc 3173
Query: 421 agtwttggcgttgggccctgaggcttttkttaccttatatktwttctkcggcagattgga 480
||| |||||||||||||||||||||||| | ||||||||| | |||| ||||||||||||
Sbjct: 3172 agtattggcgttgggccctgaggcttttgtcaccttatatgtattctgcggcagattgga 3113
Query: 481 aaagggaacaccagcagcggtgttgttgttctggttgctgtaggtatttkgatgctgctg 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3112 aaagggaacaccagcagcggtgttgttgttctggttgctgtaggtatttggatgctgctg 3053
Query: 541 ctgctgctgctgctgctgctgaacagaagccaattgatcgctgttcatcaatgcattaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 ctgctgctgctgctgctgctgaacagaagccaattgatcgctgttcatcaatgcattaga 2993
Query: 601 agaggacaccaaaggactcaattggcttcctggtcctggaacagatcctgatacatgtcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2992 agaggacaccaaaggactcaattggcttcctggtcctggaacagatcctgatacatgtcc 2933
Query: 661 gggtacttgatcgtccgtccttttatcgtttgcgtat-sataatcagacaaargcatggc 719
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 2932 gggtacttgatcgtccgtccttttatcgtttgcgtatgcataatcagacaaaggcatggc 2873
Query: 720 gcaaaaaaaaaacaaaaaraaacaaaaataagamaatgcgactcgtgcagattagtgcag 779
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2872 gcaaaaaaaaaacaaaaagaaacaaaaataagaaaatgcgactcgtgcagattagtgcag 2813
Query: 780 gacacgcgtagaaaaaaaaacgtaaaatgaataawacagatcgatgctaattctc 834
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2812 gacacgcgtagaaaaaaaaacgtaaaatgaataaaacagatcgatgctaattctc 2758
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7553
Number of Sequences: 1807
Number of extensions: 7553
Number of successful extensions: 594
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)